BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023E04SP1|AL428062
(1042 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1785 1996 0.0
3x_Contig64 744 0.0
>3x_Contig1785
Length = 37935
Score = 1996 bits (1006), Expect = 0.0
Identities = 1037/1044 (99%), Gaps = 3/1044 (0%)
Strand = Plus / Plus
Query: 1 gatctcaaaatacagctactcatttacgcaaatgtacacaaccattcgatgaattctcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5241 gatctcaaaatacagctactcatttacgcaaatgtacacaaccattcgatgaattctcct 5300
Query: 61 cattgaacaaatcaccagttgaagatgcagctttggacaccgtacggtctatctcatccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5301 cattgaacaaatcaccagttgaagatgcagctttggacaccgtacggtctatctcatccc 5360
Query: 121 aatcctcccatgaacatactgttctccataaagaaatgaacttcatatctaccgatcaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5361 aatcctcccatgaacatactgttctccataaagaaatgaacttcatatctaccgatcaaa 5420
Query: 181 agtcacaaataaatcctgattgggaagtactccccctcgacatcgagcaagcaggcatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5421 agtcacaaataaatcctgattgggaagtactccccctcgacatcgagcaagcaggcatgt 5480
Query: 241 ctatggaagaagaagtgaaattcacgaataactcgaatgaacctaagattaatactactt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5481 ctatggaagaagaagtgaaattcacgaataactcgaatgaacctaagattaatactactt 5540
Query: 301 tacaaagacaaatgaatgagtacgctctgggtgagaggcacttcagagaaactcagcaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5541 tacaaagacaaatgaatgagtacgctctgggtgagaggcacttcagagaaactcagcaat 5600
Query: 361 tcatgaactttttcaattatacttacaattaccaagaatgattgaatctttttccattcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5601 tcatgaactttttcaattatacttacaattaccaagaatgattgaatctttttccattcg 5660
Query: 421 gcttttcagtggacctatgtccacattaacattttcggtttattttatctggttacattt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5661 gcttttcagtggacctatgtccacattaacattttcggtttattttatctggttacattt 5720
Query: 481 ttttcttttctttcgattttagattcattttcacttcaccattaatgcaactgactgtca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5721 ttttcttttctttcgattttagattcattttcacttcaccattaatgcaactgactgtca 5780
Query: 541 ggggggctattttatccctggccagctttctaaaatcctcgcgtccatatacttatatcg 600
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 5781 ggggggctattttatccctggccaactttctaaaatcctcgcgtccatatacttatatcg 5840
Query: 601 cttaaataagatgaattcttacctacgtatcattaatttttattatcaattcaccgatgt 660
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5841 cttaaataaaataaattcttacctacgtatcattaatttttattatcaattcaccgatgt 5900
Query: 661 tttatcttctccctatcgaatcaaaaagaaaaaattccattaaattgaactttgctgcat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5901 tttatcttctccctatcgaatcaaaaagaaaaaattccattaaattgaactttgctgcat 5960
Query: 721 tggttatcgatatgttatggtcgatagtcaatggttttcctcgtgttatacctcagttaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5961 tggttatcgatatgttatggtcgatagtcaatggttttcctcgtgttatacctcagttaa 6020
Query: 781 ctaattttggatacttgcaatacctctttaggaaaagtaatattgaatcgccttaactca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6021 ctaattttggatacttgcaatacctctttaggaaaagtaatattgaatcgccttaactca 6080
Query: 841 gaaattaaaaaaatgattttacatgttgaaacacttaaaacatgatcttcaatgtgaagg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6081 gaaattaaaaaaatgattttacatgttgaaacacttaaaacatgatcttcaatgtgaagg 6140
Query: 901 gcatccaggttgaacggctcatccaaaaccggacatagttggagcaagctgaaaaaatca 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6141 gcatccaggttgaacggctcatccaaaaccggacatagttggagcaagctgaaaaaatca 6200
Query: 961 gcaacaatgtcggca-catcaagt-cttttcaacatggtcagcaatca-yccagcctccc 1017
||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 6201 gcaacaatgtcggcaccatcaagtccttttcaacatggtcagcaatcatcccagcctccc 6260
Query: 1018 tctagtgtaggtgcttatgatagt 1041
||||||||||||||||||||||||
Sbjct: 6261 tctagtgtaggtgcttatgatagt 6284
>3x_Contig64
Length = 1010
Score = 744 bits (375), Expect = 0.0
Identities = 411/423 (97%)
Strand = Plus / Plus
Query: 536 tgtcaggggggctattttatccctggccagctttctaaaatcctcgcgtccatatactta 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 tgtcaggggggctattttatccctggccagctttctaaaatcctcgcgtccatatactta 67
Query: 596 tatcgcttaaataagatgaattcttacctacgtatcattaatttttattatcaattcacc 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 tatcgcttaaataagatgaattcttacctacgtatcattaatttttattatcaattcacc 127
Query: 656 gatgttttatcttctccctatcgaatcaaaaagaaaaaattccattaaattgaactttgc 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 gatgttttatcttctccctatcgaatcaaaaagaaaaaattccattaaattgaactttgc 187
Query: 716 tgcattggttatcgatatgttatggtcgatagtcaatggttttcctcgtgttatacctca 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 tgcattggttatcgatatgttatggtcgatagtcaatggttttcctcgtgttatacctca 247
Query: 776 gttaactaattttggatacttgcaatacctctttaggaaaagtaatattgaatcgcctta 835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 gttaactaattttggatacttgcaatacctctttaggaaaagtaatattgaatcgcctta 307
Query: 836 actcagaaattaaaaaaatgattttacatgttgaaacacttaaaacatgatcttcaatgt 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 actcagaaattaaaaaaatgattttacatgttgaaacacttaaaacatgatcttcaatgt 367
Query: 896 gaagggcatccaggttgaacggctcatccaaaaccggacatagttggagcaagctgaaaa 955
||||||||| |||||||| || | || |||| ||| |||||||||| ||| ||||||
Sbjct: 368 gaagggcataaaggttgaaaggataataaaaaaaaggaaatagttggagaaagatgaaaa 427
Query: 956 aat 958
|||
Sbjct: 428 aat 430
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9883
Number of Sequences: 1807
Number of extensions: 9883
Number of successful extensions: 95
Number of sequences better than 1.0e-20: 2
length of query: 1042
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1026
effective length of database: 10,329,639
effective search space: 10598209614
effective search space used: 10598209614
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)